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Our inner machinery

Based on state-of-the-art machine learning methods, the inner mechanics of our solutions is the fruit of a top-notch research activity.

decoders.pngPapers about our decoders were published in the most significant scientific journals such as Bioinformatics, The Journal of Molecular Biology, Nucleic Acids Research and Protein Science.

Our software includes both free and proprietary software:

Some of our decoders still have not a Plone4bio-compliant web interface, but are ready-to-use within the annotation pipelines.

  • Interaction patch decoder - ZenDock (web interface due: 3rd quarter 2010)
  • Short Interfering RNA decoder - Sirena
  • Transmembrane beta-barrel decoder - B2-99HMMers (web interface due: 3rd quarter 2010)